EnhancerDB
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  3. rs12410780[chr1:176419654]
Enhancers that have rs12410780[chr1:176419654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 176411525 176424155 enh12395
Placenta Epithelial (MCF-7)
Transcript factors that have rs12410780[chr1:176419654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 176419649 176419662 DUXA JASPAR yes 33324394
chr1 176419650 176419661 PHOX2A JASPAR yes 33324395
chr1 176419650 176419661 PROP1 JASPAR yes 33324396
chr1 176419653 176419663 ALX3 JASPAR yes 33324397
chr1 176419653 176419663 GSX1 JASPAR yes 33324398
chr1 176419653 176419663 GSX2 JASPAR yes 33324399
chr1 176419653 176419663 HOXB2 JASPAR yes 33324400
chr1 176419653 176419663 HOXB3 JASPAR yes 33324401
chr1 176419653 176419663 MEOX2 JASPAR yes 33324402
chr1 176419653 176419663 MIXL1 JASPAR yes 33324403
chr1 176419653 176419663 MNX1 JASPAR yes 33324404
chr1 176419654 176419662 DLX6 JASPAR yes 33324405
chr1 176419654 176419662 EN1 JASPAR yes 33324406
chr1 176419654 176419662 LBX1 JASPAR yes 33324407
chr1 176419654 176419662 PAX4 JASPAR yes 33324408
chr1 176419654 176419662 PDX1 JASPAR yes 33324409
chr1 176419654 176419662 VAX1 JASPAR yes 33324410
chr1 176419654 176419662 VAX2 JASPAR yes 33324411
chr1 176419654 176419662 VSX1 JASPAR yes 33324412
chr1 176419654 176419662 VSX2 JASPAR yes 33324413
Genes associated with rs12410780[chr1:176419654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More