EnhancerDB
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  3. rs12411053[chr1:116835170]
Enhancers that have rs12411053[chr1:116835170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116827040 116837335 enh579
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs12411053[chr1:116835170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116833866 116835327 ZNF274 GTRD no Blood (GM12878) 21331876
chr1 116833995 116835280 ZNF274 GTRD no Blood (GM12878) 21331877
chr1 116834575 116835492 ZNF274 GTRD no Blood (GM12878) 21331880
chr1 116835127 116835694 ZNF143 GTRD no Epithelial (MCF-7) 21331882
Genes associated with rs12411053[chr1:116835170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 221987 Spleen 0.174975 1061