EnhancerDB
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  3. rs12423594[chr12:54222525]
Enhancers that have rs12423594[chr12:54222525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54212382 54224675 enh43743
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs12423594[chr12:54222525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54222317 54223067 ZNF274 GTRD no Cervix (HeLa-S3) 21550056
chr12 54222331 54223185 ZNF274 GTRD no Cervix (HeLa-S3) 21550057
chr12 54222436 54223081 ZNF274 GTRD no Cervix (HeLa-S3) 21550058
chr12 54222507 54222528 IRF1 JASPAR yes 121012044
chr12 54222513 54222534 IRF1 JASPAR yes 121012047
chr12 54222518 54222536 IRF2 JASPAR yes 121012049
chr12 54222519 54222534 FOXP1 JASPAR yes 121012050
chr12 54222519 54222534 MEF2C JASPAR yes 121012051
chr12 54222519 54222540 IRF1 JASPAR yes 121012052
chr12 54222520 54222532 FOXC2 JASPAR yes 121012053
chr12 54222520 54222533 POU2F2 JASPAR yes 121012054
chr12 54222520 54222534 POU1F1 JASPAR yes 121012055
chr12 54222521 54222532 FOXC1 JASPAR yes 121012056
chr12 54222521 54222536 PRDM1 JASPAR yes 121012057
chr12 54222521 54222536 STAT2 JASPAR yes 121012058
chr12 54222522 54222526 YY1 TRANSFAC yes 121012059
chr12 54222522 54222536 STAT1 JASPAR yes 121012060
chr12 54222523 54222535 IRF1 JASPAR yes 121012061
chr12 54222523 54222537 IRF7 JASPAR yes 121012062
chr12 54222523 54222537 IRF8 JASPAR yes 121012063
chr12 54222523 54222538 IRF9 JASPAR yes 121012064
Genes associated with rs12423594[chr12:54222525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More