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- rs12425020[chr12:72751622]
Enhancers that have rs12425020[chr12:72751622]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
72751305 |
72755455 |
enh111953 |
|
|
Transcript factors that have rs12425020[chr12:72751622]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
72751620
|
72751631
|
CDX2
|
JASPAR
|
yes
|
|
121855516
|
|
|
chr12
|
72751621
|
72751632
|
HOXA10
|
JASPAR
|
yes
|
|
121855517
|
|
|
chr12
|
72751622
|
72751631
|
CDX1
|
JASPAR
|
yes
|
|
121855518
|
|
|
chr12
|
72751622
|
72751632
|
HOXA13
|
JASPAR
|
yes
|
|
121855519
|
|
|
chr12
|
72751622
|
72751632
|
HOXB13
|
JASPAR
|
yes
|
|
121855520
|
|
|
chr12
|
72751622
|
72751632
|
HOXD13
|
JASPAR
|
yes
|
|
121855521
|
|
Genes associated with rs12425020[chr12:72751622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
71833550
|
71980090
|
+
|
LGR5
|
ENSG00000139292.8
|
71833550
|
771532
|
Esophagus
|
0.0404132
|
12335
|
|