EnhancerDB
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  3. rs12461320[chr19:1188829]
Enhancers that have rs12461320[chr19:1188829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1187565 1198948 enh17840
Bone Marrow (K562) Blood (T-cell) Bone (Osteoblast) Placenta Colon (HCT116) Thymus
Transcript factors that have rs12461320[chr19:1188829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1188556 1190366 TCF7L2 GTRD no Colon (HCT116) 21831721
chr19 1188556 1190366 TCF7L2 GTRD no Colon (HCT116) 108351081
chr19 1188634 1189929 ZNF274 GTRD no Bone Marrow (K562) 21831722
chr19 1188634 1189929 ZNF274 GTRD no Bone Marrow (K562) 108351082
chr19 1188788 1190526 TCF7L2 GTRD no Colon (HCT116) 21831723
chr19 1188788 1190526 TCF7L2 GTRD no Colon (HCT116) 108351083
chr19 1188825 1188834 SNAI2 JASPAR yes 111999892
chr19 1188825 1188835 ID4 JASPAR yes 111999893
chr19 1188825 1188835 TCF3 JASPAR yes 111999894
chr19 1188825 1188835 TCF4 JASPAR yes 111999895
chr19 1188827 1188836 ZEB1 JASPAR yes 111999896
Genes associated with rs12461320[chr19:1188829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More