EnhancerDB
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  3. rs12530170[chr6:36623083]
Enhancers that have rs12530170[chr6:36623083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12530170[chr6:36623083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36623073 36623091 SRF JASPAR yes 101354985
chr6 36623077 36623087 HOXC10 JASPAR yes 101354986
chr6 36623077 36623087 HOXD11 JASPAR yes 101354987
chr6 36623077 36623087 HOXD13 JASPAR yes 101354988
chr6 36623077 36623088 HOXA10 JASPAR yes 101354989
chr6 36623077 36623088 HOXC11 JASPAR yes 101354990
chr6 36623077 36623088 HOXC12 JASPAR yes 101354991
chr6 36623077 36623088 HOXD12 JASPAR yes 101354992
chr6 36623078 36623087 CDX1 JASPAR yes 101354993
chr6 36623078 36623089 CDX2 JASPAR yes 101354994
chr6 36623082 36623093 NFE2L2 JASPAR yes 101354995
Genes associated with rs12530170[chr6:36623083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More