EnhancerDB
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  3. rs12565780[chr1:234736168]
Enhancers that have rs12565780[chr1:234736168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234731749 234739762 enh992
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus
Transcript factors that have rs12565780[chr1:234736168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234735275 234737920 POLR2A UCSC Txn Factor no Conserved 107880537
chr1 234735275 234737920 POLR2A UCSC Txn Factor no Conserved 107880538
chr1 234735425 234736206 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21394947
chr1 234735500 234736178 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21394965
chr1 234735681 234736191 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21394991
chr1 234735752 234736188 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21395002
chr1 234735860 234736236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395012
chr1 234735866 234736202 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21395013
chr1 234735883 234736190 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21395014
chr1 234735890 234736200 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21395015
chr1 234735920 234736204 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395016
chr1 234735987 234736828 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21395020
chr1 234735987 234736828 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107880539
chr1 234736041 234736665 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395021
chr1 234736041 234736665 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880540
chr1 234736054 234736717 P63 GTRD no Skin (Keratinocyte) 107880541
chr1 234736141 234736737 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107880542
chr1 234736166 234736187 ZNF263 JASPAR yes 36293141
Genes associated with rs12565780[chr1:234736168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More