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- rs12596146[chr16:89992238]
Enhancers that have rs12596146[chr16:89992238]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
89989025 |
89994655 |
enh4189 |
|
|
Transcript factors that have rs12596146[chr16:89992238]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
89991500
|
89992996
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108227378
|
|
|
chr16
|
89991848
|
89992578
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108227379
|
|
|
chr16
|
89991851
|
89993021
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108227380
|
|
|
chr16
|
89991939
|
89992935
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108227381
|
|
|
chr16
|
89991961
|
89992890
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108227382
|
|
|
chr16
|
89992008
|
89992940
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108227383
|
|
|
chr16
|
89992184
|
89992534
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108227384
|
|
|
chr16
|
89992230
|
89992246
|
ZNF143
|
JASPAR
|
yes
|
|
12360032
|
|
|
chr16
|
89992238
|
89992247
|
THAP1
|
JASPAR
|
yes
|
|
12360033
|
|
Genes associated with rs12596146[chr16:89992238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |