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- rs12596468[chr16:82148992]
Enhancers that have rs12596468[chr16:82148992]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
82143625 |
82149195 |
enh16845 |
|
|
Transcript factors that have rs12596468[chr16:82148992]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
82148874
|
82149215
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21718408
|
|
|
chr16
|
82148983
|
82148992
|
NKX3-2
|
JASPAR
|
yes
|
|
11886132
|
|
|
chr16
|
82148983
|
82148993
|
NKX2-3
|
JASPAR
|
yes
|
|
11886133
|
|
|
chr16
|
82148989
|
82148993
|
TEAD2
|
TRANSFAC
|
yes
|
|
11886134
|
|
Genes associated with rs12596468[chr16:82148992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
82031221
|
82045093
|
-
|
SDR42E1
|
ENSG00000184860.5
|
82045093
|
103899
|
Esophagus
|
0.00935684
|
15103
|
|
|
chr16
|
82031221
|
82045093
|
-
|
SDR42E1
|
ENSG00000184860.5
|
82045093
|
103899
|
Esophagus
|
0.0439299
|
15103
|
|