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- rs12598285[chr16:1046616]
Enhancers that have rs12598285[chr16:1046616]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1045545 |
1050015 |
enh88212 |
|
|
Transcript factors that have rs12598285[chr16:1046616]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1043552
|
1049740
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170980
|
|
|
chr16
|
1043582
|
1047178
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170981
|
|
|
chr16
|
1043594
|
1047476
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170982
|
|
|
chr16
|
1043614
|
1047490
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170983
|
|
|
chr16
|
1043655
|
1047419
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170984
|
|
|
chr16
|
1046033
|
1046912
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170985
|
|
|
chr16
|
1046067
|
1047215
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108170986
|
|
|
chr16
|
1046467
|
1047532
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170987
|
|
|
chr16
|
1046601
|
1046617
|
GLIS1
|
JASPAR
|
yes
|
|
9128500
|
|
|
chr16
|
1046611
|
1046621
|
ID4
|
JASPAR
|
yes
|
|
9128502
|
|
|
chr16
|
1046611
|
1046621
|
TCF3
|
JASPAR
|
yes
|
|
9128503
|
|
|
chr16
|
1046611
|
1046621
|
TCF4
|
JASPAR
|
yes
|
|
9128504
|
|
|
chr16
|
1046612
|
1046621
|
SNAI2
|
JASPAR
|
yes
|
|
9128505
|
|
|
chr16
|
1046613
|
1046618
|
USF2
|
TRANSFAC
|
yes
|
|
9128506
|
|
Genes associated with rs12598285[chr16:1046616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |