EnhancerDB
  1. Home
  2. SNP
  3. rs12600509[chr17:59646380]
Enhancers that have rs12600509[chr17:59646380]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59642446 59655215 enh57714
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs12600509[chr17:59646380]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59645803 59646459 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777514
chr17 59645803 59646459 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279534
chr17 59645843 59646459 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777515
chr17 59645843 59646459 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279535
chr17 59645845 59646456 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777516
chr17 59645845 59646456 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279536
chr17 59645845 59646482 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777517
chr17 59645845 59646482 EP300 UCSC Txn Factor no Conserved 108279537
chr17 59645845 59646482 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279538
chr17 59645848 59646392 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21777518
chr17 59645848 59646392 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108279539
chr17 59645864 59646384 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777519
chr17 59645864 59646384 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279540
chr17 59645887 59646458 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777521
chr17 59645887 59646458 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279542
chr17 59645887 59646476 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777522
chr17 59645887 59646476 TCF12 UCSC Txn Factor no Conserved 108279543
chr17 59645887 59646476 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279544
chr17 59646089 59646466 JUN UCSC Txn Factor no Conserved 108279581
chr17 59646126 59646466 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777549
chr17 59646126 59646466 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108279582
chr17 59646140 59646404 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777550
chr17 59646140 59646404 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279583
chr17 59646179 59646529 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777551
chr17 59646179 59646529 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279584
chr17 59646180 59646644 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108279585
chr17 59646263 59646543 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21777552
chr17 59646263 59646543 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108279586
chr17 59646372 59646384 PKNOX1 JASPAR yes 55165350
chr17 59646372 59646384 PKNOX2 JASPAR yes 55165351
chr17 59646372 59646384 TGIF2 JASPAR yes 55165352
chr17 59646377 59646383 ATF1 TRANSFAC yes 55165353
chr17 59646377 59646389 CREB1 JASPAR yes 55165354
chr17 59646379 59646396 PAX1 JASPAR yes 55165355
Genes associated with rs12600509[chr17:59646380], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More