EnhancerDB
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  3. rs12728774[chr1:236148117]
Enhancers that have rs12728774[chr1:236148117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236147814 236148198 vista5737
VISTA
Transcript factors that have rs12728774[chr1:236148117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236147093 236148151 ZNF143 GTRD no Epithelial (MCF-7) 107886555
chr1 236147243 236149391 ZNF274 GTRD no Blood (GM12878) 107886557
chr1 236147338 236148192 ZNF143 GTRD no Epithelial (MCF-7) 107886558
chr1 236147424 236148274 ZNF143 GTRD no Epithelial (MCF-7) 107886561
chr1 236147616 236149123 ZNF274 GTRD no Blood (GM12878) 107886568
chr1 236147709 236148830 ZNF274 GTRD no Blood (GM12878) 107886571
chr1 236147746 236148156 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107886572
chr1 236147750 236148681 ZNF274 GTRD no Blood (GM12878) 107886573
chr1 236147792 236148122 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107886575
chr1 236147797 236148117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107886576
chr1 236147798 236148887 ZNF274 GTRD no Blood (GM12878) 107886577
chr1 236147866 236148206 ZNF274 GTRD no Bone Marrow (K562) 107886581
chr1 236147943 236149168 ZNF274 GTRD no Blood (GM12878) 107886583
chr1 236147974 236148194 ZNF274 GTRD no Bone Marrow (K562) 107886584
chr1 236148006 236148940 ZNF274 GTRD no Blood (GM12878) 107886585
chr1 236148031 236149003 ZNF274 GTRD no Blood (GM12878) 107886586
chr1 236148103 236148118 FOXP1 JASPAR yes 118490338
chr1 236148112 236148118 SOX10 JASPAR yes 118490339
Genes associated with rs12728774[chr1:236148117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More