EnhancerDB
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  3. rs1288505[chr1:53756562]
Enhancers that have rs1288505[chr1:53756562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53755300 53765134 enh42963
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs1288505[chr1:53756562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53756555 53756570 NR2C2 JASPAR yes 28920915
chr1 53756559 53756577 RARA JASPAR yes 28920916
Genes associated with rs1288505[chr1:53756562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More