EnhancerDB
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  3. rs1288506[chr1:53756519]
Enhancers that have rs1288506[chr1:53756519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53755300 53765134 enh42963
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs1288506[chr1:53756519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53756504 53756524 RREB1 JASPAR yes 28920905
chr1 53756505 53756526 ZNF263 JASPAR yes 28920906
chr1 53756506 53756526 RREB1 JASPAR yes 28920907
chr1 53756509 53756519 ZNF740 JASPAR yes 28920909
chr1 53756512 53756532 RREB1 JASPAR yes 28920910
chr1 53756513 53756523 SP1 JASPAR yes 28920911
chr1 53756515 53756525 ZNF740 JASPAR yes 28920912
Genes associated with rs1288506[chr1:53756519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More