EnhancerDB
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  3. rs1288509[chr1:53755911]
Enhancers that have rs1288509[chr1:53755911]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53755300 53765134 enh42963
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs1288509[chr1:53755911]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53755899 53755918 CTCF JASPAR yes 28920795
chr1 53755902 53755916 ZIC1 JASPAR yes 28920797
chr1 53755902 53755917 ZIC3 JASPAR yes 28920798
chr1 53755902 53755917 ZIC4 JASPAR yes 28920799
Genes associated with rs1288509[chr1:53755911], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More