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- rs12928460[chr16:1179031]
Enhancers that have rs12928460[chr16:1179031]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
Transcript factors that have rs12928460[chr16:1179031]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1177643
|
1179518
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684269
|
|
|
chr16
|
1177643
|
1179518
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171173
|
|
|
chr16
|
1178415
|
1179596
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108171174
|
|
|
chr16
|
1178695
|
1179511
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171175
|
|
|
chr16
|
1178731
|
1179618
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171176
|
|
Genes associated with rs12928460[chr16:1179031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
770581
|
772601
|
+
|
FAM173A
|
ENSG00000103254.5
|
770581
|
406430
|
Liver
|
0.304927
|
14364
|
|