-
Home
- SNP
- rs12939929[chr17:78148469]
Enhancers that have rs12939929[chr17:78148469]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
78147325 |
78151475 |
enh17429 |
|
|
Transcript factors that have rs12939929[chr17:78148469]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
78148371
|
78149336
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306334
|
|
|
chr17
|
78148372
|
78149330
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306335
|
|
|
chr17
|
78148398
|
78149291
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306336
|
|
|
chr17
|
78148466
|
78148476
|
TBX21
|
JASPAR
|
yes
|
|
56243450
|
|
|
chr17
|
78148466
|
78148479
|
EOMES
|
JASPAR
|
yes
|
|
56243451
|
|
Genes associated with rs12939929[chr17:78148469], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |