EnhancerDB
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  3. rs12977334[chr19:1946265]
Enhancers that have rs12977334[chr19:1946265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1941720 1950194 enh17846
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (T-cell)
Transcript factors that have rs12977334[chr19:1946265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 21834083
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355816
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355817
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355818
chr19 1946263 1946278 FOXA1 JASPAR yes 112038572
chr19 1946264 1946276 FOXI1 JASPAR yes 112038573
chr19 1946264 1946278 POU4F1 JASPAR yes 112038574
chr19 1946264 1946279 FOXP1 JASPAR yes 112038575
chr19 1946264 1946279 HNF1A JASPAR yes 112038576
chr19 1946265 1946277 FOXC2 JASPAR yes 112038577
chr19 1946265 1946279 ONECUT2 JASPAR yes 112038578
chr19 1946265 1946279 ONECUT3 JASPAR yes 112038579
Genes associated with rs12977334[chr19:1946265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More