EnhancerDB
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  3. rs12978421[chr19:3361560]
Enhancers that have rs12978421[chr19:3361560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3360896 3361804 vista28282
VISTA
Transcript factors that have rs12978421[chr19:3361560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3357253 3363129 ZNF274 GTRD no Bone Marrow (K562) 21838800
chr19 3357253 3363129 ZNF274 GTRD no Bone Marrow (K562) 108365663
chr19 3357253 3363129 ZNF274 GTRD no Bone Marrow (K562) 108365664
chr19 3357253 3363129 ZNF274 GTRD no Bone Marrow (K562) 108365665
chr19 3357416 3363122 ZNF274 GTRD no Bone Marrow (K562) 21838801
chr19 3357416 3363122 ZNF274 GTRD no Bone Marrow (K562) 108365670
chr19 3357416 3363122 ZNF274 GTRD no Bone Marrow (K562) 108365671
chr19 3357416 3363122 ZNF274 GTRD no Bone Marrow (K562) 108365672
chr19 3357454 3361807 TCF7L2 GTRD no Colon (HCT116) 108365673
chr19 3357454 3361807 TCF7L2 GTRD no Colon (HCT116) 108365674
chr19 3357454 3361807 TCF7L2 GTRD no Colon (HCT116) 108365675
chr19 3357484 3361739 TCF7L2 GTRD no Colon (HCT116) 108365676
chr19 3357484 3361739 TCF7L2 GTRD no Colon (HCT116) 108365677
chr19 3357484 3361739 TCF7L2 GTRD no Colon (HCT116) 108365678
chr19 3357576 3361570 TCF7L2 GTRD no Colon (HCT116) 108365679
chr19 3357576 3361570 TCF7L2 GTRD no Colon (HCT116) 108365680
chr19 3357576 3361570 TCF7L2 GTRD no Colon (HCT116) 108365681
chr19 3357743 3362526 ZNF274 GTRD no Bone Marrow (K562) 21838802
chr19 3357743 3362526 ZNF274 GTRD no Bone Marrow (K562) 108365688
chr19 3357743 3362526 ZNF274 GTRD no Bone Marrow (K562) 108365689
chr19 3357743 3362526 ZNF274 GTRD no Bone Marrow (K562) 108365690
chr19 3357863 3363004 ZNF274 GTRD no Bone Marrow (K562) 21838803
chr19 3357863 3363004 ZNF274 GTRD no Bone Marrow (K562) 108365697
chr19 3357863 3363004 ZNF274 GTRD no Bone Marrow (K562) 108365698
chr19 3357863 3363004 ZNF274 GTRD no Bone Marrow (K562) 108365699
chr19 3357870 3362384 ZNF274 GTRD no Blood (GM12878) 21838804
chr19 3357870 3362384 ZNF274 GTRD no Blood (GM12878) 108365702
chr19 3357870 3362384 ZNF274 GTRD no Blood (GM12878) 108365703
chr19 3357870 3362384 ZNF274 GTRD no Blood (GM12878) 108365704
chr19 3358056 3362207 ZNF274 GTRD no Bone Marrow (K562) 21838805
chr19 3358056 3362207 ZNF274 GTRD no Bone Marrow (K562) 108365720
chr19 3358056 3362207 ZNF274 GTRD no Bone Marrow (K562) 108365721
chr19 3358056 3362207 ZNF274 GTRD no Bone Marrow (K562) 108365722
chr19 3358082 3361763 TCF7L2 GTRD no Colon (HCT116) 108365723
chr19 3358082 3361763 TCF7L2 GTRD no Colon (HCT116) 108365724
chr19 3358082 3361763 TCF7L2 GTRD no Colon (HCT116) 108365725
chr19 3358153 3362180 TCF7L2 GTRD no Colon (HCT116) 108365728
chr19 3358153 3362180 TCF7L2 GTRD no Colon (HCT116) 108365729
chr19 3358153 3362180 TCF7L2 GTRD no Colon (HCT116) 108365730
chr19 3358157 3361679 ZNF274 GTRD no Bone Marrow (K562) 108365731
chr19 3358157 3361679 ZNF274 GTRD no Bone Marrow (K562) 108365732
chr19 3358157 3361679 ZNF274 GTRD no Bone Marrow (K562) 108365733
chr19 3358194 3361592 TCF7L2 GTRD no Colon (HCT116) 108365734
chr19 3358194 3361592 TCF7L2 GTRD no Colon (HCT116) 108365735
chr19 3358194 3361592 TCF7L2 GTRD no Colon (HCT116) 108365736
chr19 3359002 3361739 TCF7L2 GTRD no Colon (HCT116) 108365778
chr19 3359002 3361739 TCF7L2 GTRD no Colon (HCT116) 108365779
chr19 3359073 3361662 ZNF274 GTRD no Blood (GM12878) 108365793
chr19 3359073 3361662 ZNF274 GTRD no Blood (GM12878) 108365794
chr19 3359470 3362731 ZNF274 GTRD no Blood (GM12878) 21838806
chr19 3359470 3362731 ZNF274 GTRD no Blood (GM12878) 108365799
chr19 3359470 3362731 ZNF274 GTRD no Blood (GM12878) 108365800
chr19 3359507 3361575 ZNF274 GTRD no Blood (GM12878) 108365801
chr19 3359507 3361575 ZNF274 GTRD no Blood (GM12878) 108365802
chr19 3359981 3362198 ZNF274 GTRD no Blood (GM12878) 108365809
chr19 3359981 3362198 ZNF274 GTRD no Blood (GM12878) 108365810
chr19 3360090 3362770 ZNF274 GTRD no Bone Marrow (K562) 21838807
chr19 3360090 3362770 ZNF274 GTRD no Bone Marrow (K562) 108365830
chr19 3360090 3362770 ZNF274 GTRD no Bone Marrow (K562) 108365831
chr19 3360139 3362875 ZNF274 GTRD no Bone Marrow (K562) 21838808
chr19 3360139 3362875 ZNF274 GTRD no Bone Marrow (K562) 108365840
chr19 3360139 3362875 ZNF274 GTRD no Bone Marrow (K562) 108365841
chr19 3360149 3362940 ZNF274 GTRD no Blood (GM12878) 21838809
chr19 3360149 3362940 ZNF274 GTRD no Blood (GM12878) 108365846
chr19 3360149 3362940 ZNF274 GTRD no Blood (GM12878) 108365847
chr19 3360183 3362971 ZNF274 GTRD no Blood (GM12878) 21838810
chr19 3360183 3362971 ZNF274 GTRD no Blood (GM12878) 108365850
chr19 3360183 3362971 ZNF274 GTRD no Blood (GM12878) 108365851
chr19 3360228 3362435 ZBTB33 GTRD no Lung (A549) 21838811
chr19 3360228 3362435 ZBTB33 GTRD no Lung (A549) 108365860
chr19 3360228 3362435 ZBTB33 GTRD no Lung (A549) 108365861
chr19 3360246 3363277 ZNF274 GTRD no Bone Marrow (K562) 21838812
chr19 3360246 3363277 ZNF274 GTRD no Bone Marrow (K562) 108365864
chr19 3360246 3363277 ZNF274 GTRD no Bone Marrow (K562) 108365865
chr19 3360250 3363129 ZNF274 GTRD no Bone Marrow (K562) 21838813
chr19 3360250 3363129 ZNF274 GTRD no Bone Marrow (K562) 108365866
chr19 3360250 3363129 ZNF274 GTRD no Bone Marrow (K562) 108365867
chr19 3360295 3362076 ZNF274 GTRD no Blood (GM12878) 108365880
chr19 3360295 3362076 ZNF274 GTRD no Blood (GM12878) 108365881
chr19 3360311 3362009 ZNF274 GTRD no Blood (GM12878) 108365884
chr19 3360311 3362009 ZNF274 GTRD no Blood (GM12878) 108365885
chr19 3360312 3362937 ZNF274 GTRD no Blood (GM12878) 21838814
chr19 3360312 3362937 ZNF274 GTRD no Blood (GM12878) 108365888
chr19 3360312 3362937 ZNF274 GTRD no Blood (GM12878) 108365889
chr19 3360319 3362957 ZBTB33 GTRD no Lung (A549) 21838815
chr19 3360319 3362957 ZBTB33 GTRD no Lung (A549) 108365895
chr19 3360319 3362957 ZBTB33 GTRD no Lung (A549) 108365896
chr19 3360322 3362055 ZNF274 GTRD no Blood (GM12878) 108365899
chr19 3360322 3362055 ZNF274 GTRD no Blood (GM12878) 108365900
chr19 3360322 3362584 ZNF274 GTRD no Blood (GM12878) 21838816
chr19 3360322 3362584 ZNF274 GTRD no Blood (GM12878) 108365901
chr19 3360322 3362584 ZNF274 GTRD no Blood (GM12878) 108365902
chr19 3360325 3362064 ZNF274 GTRD no Blood (GM12878) 108365905
chr19 3360325 3362064 ZNF274 GTRD no Blood (GM12878) 108365906
chr19 3360331 3362158 ZNF274 GTRD no Blood (GM12878) 108365915
chr19 3360331 3362158 ZNF274 GTRD no Blood (GM12878) 108365916
chr19 3360339 3362514 ZBTB33 GTRD no Lung (A549) 21838817
chr19 3360339 3362514 ZBTB33 GTRD no Lung (A549) 108365921
chr19 3360339 3362514 ZBTB33 GTRD no Lung (A549) 108365922
chr19 3360361 3362526 ZNF274 GTRD no Blood (GM12878) 21838818
chr19 3360361 3362526 ZNF274 GTRD no Blood (GM12878) 108365939
chr19 3360368 3361568 ZNF274 GTRD no Bone Marrow (K562) 108365942
chr19 3360387 3361698 ZBTB33 GTRD no Lung (A549) 108365949
chr19 3360508 3362687 ZNF274 GTRD no Bone Marrow (K562) 21838819
chr19 3360508 3362687 ZNF274 GTRD no Bone Marrow (K562) 108365975
chr19 3360949 3362011 ZNF274 GTRD no Blood (GM12878) 108366031
chr19 3360949 3362023 ZNF274 GTRD no Blood (GM12878) 108366032
chr19 3361004 3362578 ZNF274 GTRD no Bone Marrow (K562) 21838820
chr19 3361004 3362578 ZNF274 GTRD no Bone Marrow (K562) 108366043
chr19 3361026 3361912 ZNF274 GTRD no Blood (GM12878) 108366052
chr19 3361122 3361594 ZNF274 GTRD no Blood (GM12878) 108366066
chr19 3361225 3361609 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108366069
chr19 3361284 3362432 ZNF274 GTRD no Bone Marrow (K562) 21838821
chr19 3361284 3362432 ZNF274 GTRD no Bone Marrow (K562) 108366071
chr19 3361451 3362159 ZNF274 GTRD no Bone Marrow (K562) 108366072
chr19 3361488 3361930 ZNF274 GTRD no Bone Marrow (K562) 108366073
chr19 3361490 3362056 ZNF274 GTRD no Bone Marrow (K562) 108366074
chr19 3361490 3362092 ZNF274 GTRD no Bone Marrow (K562) 108366075
chr19 3361493 3362244 ZNF274 GTRD no Blood (GM12878) 21838822
chr19 3361493 3362244 ZNF274 GTRD no Blood (GM12878) 108366076
chr19 3361503 3361826 ZNF274 GTRD no Blood (GM12878) 108366077
chr19 3361526 3362443 ZNF274 GTRD no Bone Marrow (K562) 21838823
chr19 3361526 3362443 ZNF274 GTRD no Bone Marrow (K562) 108366078
chr19 3361531 3362692 ZNF274 GTRD no Bone Marrow (K562) 21838824
chr19 3361531 3362692 ZNF274 GTRD no Bone Marrow (K562) 108366079
chr19 3361536 3361921 ZNF274 GTRD no Bone Marrow (K562) 108366080
chr19 3361539 3362197 ZNF274 GTRD no Blood (GM12878) 108366081
chr19 3361541 3361561 ESR1 JASPAR yes 70786616
chr19 3361541 3362066 ZBTB33 GTRD no Lung (A549) 108366082
chr19 3361543 3362317 ZBTB33 GTRD no Lung (A549) 21838825
chr19 3361543 3362317 ZBTB33 GTRD no Lung (A549) 108366083
chr19 3361544 3361562 ESR2 JASPAR yes 70786617
chr19 3361556 3361577 IRF1 JASPAR yes 70786618
chr19 3361558 3361573 PRDM1 JASPAR yes 70786619
chr19 3361560 3361574 IRF7 JASPAR yes 70786620
chr19 3361560 3361574 IRF8 JASPAR yes 70786621
Genes associated with rs12978421[chr19:3361560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 144711 Heart 0.212576 16808