EnhancerDB
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Enhancers that have rs12980370[chr19:1027343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
Transcript factors that have rs12980370[chr19:1027343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1025080 1029211 TCF7L2 GTRD no Colon (HCT116) 108349601
chr19 1025275 1029341 TCF7L2 GTRD no Colon (HCT116) 108349602
chr19 1025442 1029351 ZNF274 GTRD no Bone Marrow (K562) 108349603
chr19 1025601 1029127 ZNF274 GTRD no Bone Marrow (K562) 108349604
chr19 1025647 1029078 TCF7L2 GTRD no Colon (HCT116) 108349605
chr19 1025652 1029222 ZNF274 GTRD no Bone Marrow (K562) 108349606
chr19 1025681 1029130 ZNF274 GTRD no Liver (HepG2) 108349607
chr19 1025693 1029134 ZNF274 GTRD no Blood (GM12878) 108349608
chr19 1025698 1029053 ZNF274 GTRD no Bone Marrow (K562) 108349609
chr19 1025720 1028788 ZNF274 GTRD no Blood (GM12878) 108349610
chr19 1025721 1029189 ZNF274 GTRD no Bone Marrow (K562) 108349611
chr19 1025723 1029154 ZNF274 GTRD no Blood (GM12878) 108349612
chr19 1025725 1029109 ZNF274 GTRD no Blood (GM12878) 108349613
chr19 1025761 1028975 ZNF274 GTRD no Liver (HepG2) 108349614
chr19 1025761 1029218 ZNF274 GTRD no Blood (GM12878) 108349615
chr19 1025770 1029770 ZNF274 GTRD no Bone Marrow (K562) 108349616
chr19 1025772 1028979 ZNF274 GTRD no Bone Marrow (K562) 108349617
chr19 1025773 1029106 ZNF274 GTRD no Blood (GM12878) 108349618
chr19 1025777 1028364 ZNF274 GTRD no Cervix (HeLa-S3) 108349619
chr19 1025804 1029131 ZNF274 GTRD no Bone Marrow (K562) 108349620
chr19 1025868 1029044 ZNF274 GTRD no Blood (GM12878) 108349621
chr19 1025880 1029198 TCF7L2 GTRD no Colon (HCT116) 108349622
chr19 1025883 1028716 ZNF274 GTRD no Bone Marrow (K562) 108349623
chr19 1025930 1029099 TCF7L2 GTRD no Colon (HCT116) 108349624
chr19 1025939 1029157 ZBTB33 GTRD no Lung (A549) 108349625
chr19 1025952 1029217 ZNF274 GTRD no Cervix (HeLa-S3) 108349626
chr19 1026078 1029377 TCF7L2 GTRD no Colon (HCT116) 108349627
chr19 1026088 1029207 ZNF274 GTRD no Blood (GM12878) 108349628
chr19 1026128 1029324 TCF7L2 GTRD no Colon (HCT116) 108349629
chr19 1026709 1029140 ZBTB33 GTRD no Lung (A549) 108349630
chr19 1026771 1028754 ZNF274 GTRD no Blood (GM12878) 108349631
chr19 1026869 1028698 ZNF274 GTRD no Blood (GM12878) 108349632
chr19 1026870 1029138 ZBTB33 GTRD no Brain (SK-N-SH) 108349633
chr19 1027068 1028985 P63 GTRD no Skin (Keratinocyte) 108349634
chr19 1027075 1028421 ZNF274 GTRD no Blood (GM12878) 108349635
chr19 1027097 1028640 ZBTB33 GTRD no Lung (A549) 108349636
chr19 1027101 1028680 ZBTB33 GTRD no Lung (A549) 108349637
chr19 1027212 1029053 ZNF274 GTRD no Bone Marrow (K562) 108349638
chr19 1027311 1029050 TCF7L2 GTRD no Colon (HCT116) 108349639
chr19 1027327 1029138 TCF7L2 GTRD no Colon (HCT116) 108349640
chr19 1027329 1029188 ZNF274 GTRD no Liver (HepG2) 108349641
chr19 1027340 1029150 ZNF143 GTRD no Epithelial (MCF-7) 108349642
Genes associated with rs12980370[chr19:1027343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More