EnhancerDB
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  3. rs13172980[chr5:79649991]
Enhancers that have rs13172980[chr5:79649991]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79648205 79652355 enh113997
Brain (SK-N-MC)
Transcript factors that have rs13172980[chr5:79649991]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79649980 79649995 MEF2C JASPAR yes 63719097
chr5 79649981 79649996 MEF2A JASPAR yes 63719098
chr5 79649984 79649998 FOXF2 JASPAR yes 63719099
chr5 79649984 79649998 ONECUT2 JASPAR yes 63719100
chr5 79649984 79649998 ONECUT3 JASPAR yes 63719101
chr5 79649984 79649999 FOXP1 JASPAR yes 63719102
chr5 79649985 79650000 FOXA1 JASPAR yes 63719103
chr5 79649986 79649997 FOXB1 JASPAR yes 63719104
chr5 79649986 79649997 FOXC1 JASPAR yes 63719105
chr5 79649986 79649998 FOXC2 JASPAR yes 63719106
chr5 79649987 79649999 FOXI1 JASPAR yes 63719107
chr5 79649988 79650002 ONECUT2 JASPAR yes 63719108
chr5 79649988 79650002 ONECUT3 JASPAR yes 63719109
chr5 79649988 79650003 FOXP1 JASPAR yes 63719110
chr5 79649988 79650003 HNF1A JASPAR yes 63719111
chr5 79649989 79650003 POU4F1 JASPAR yes 63719112
chr5 79649989 79650004 FOXA1 JASPAR yes 63719113
chr5 79649989 79650005 POU4F2 JASPAR yes 63719114
chr5 79649989 79650005 POU4F3 JASPAR yes 63719115
chr5 79649990 79650001 FOXB1 JASPAR yes 63719116
chr5 79649990 79650001 FOXC1 JASPAR yes 63719117
chr5 79649990 79650001 PROP1 JASPAR yes 63719118
chr5 79649990 79650002 FOXC2 JASPAR yes 63719119
chr5 79649991 79650003 FOXI1 JASPAR yes 63719120
Genes associated with rs13172980[chr5:79649991], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More