EnhancerDB
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  3. rs139080999[chr5:172715259]
Enhancers that have rs139080999[chr5:172715259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs139080999[chr5:172715259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172715255 172715265 ID4 JASPAR yes 67863463
chr5 172715257 172715262 USF2 TRANSFAC yes 67863464
Genes associated with rs139080999[chr5:172715259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More