EnhancerDB
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  3. rs139109731[chr1:54629868]
Enhancers that have rs139109731[chr1:54629868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54626849 54631535 enh49766
Esophagus Bone Marrow (K562) Large Intestine
Transcript factors that have rs139109731[chr1:54629868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54629862 54629872 TBX21 JASPAR yes 28961445
chr1 54629862 54629873 TBX20 JASPAR yes 28961446
chr1 54629862 54629873 TBX2 JASPAR yes 28961447
chr1 54629862 54629875 EOMES JASPAR yes 28961448
chr1 54629863 54629871 MGA JASPAR yes 28961449
chr1 54629863 54629871 TBX15 JASPAR yes 28961450
chr1 54629863 54629871 TBX1 JASPAR yes 28961451
chr1 54629863 54629871 TBX4 JASPAR yes 28961452
chr1 54629863 54629871 TBX5 JASPAR yes 28961453
chr1 54629863 54629873 TBR1 JASPAR yes 28961454
chr1 54629865 54629880 FOXA1 JASPAR yes 28961455
chr1 54629866 54629878 FOXI1 JASPAR yes 28961456
chr1 54629866 54629880 POU4F1 JASPAR yes 28961457
chr1 54629866 54629881 HNF1A JASPAR yes 28961458
chr1 54629867 54629879 FOXC2 JASPAR yes 28961459
chr1 54629867 54629880 HNF1B JASPAR yes 28961460
chr1 54629867 54629881 ONECUT2 JASPAR yes 28961461
chr1 54629867 54629881 ONECUT3 JASPAR yes 28961462
chr1 54629868 54629879 FOXB1 JASPAR yes 28961463
chr1 54629868 54629879 FOXC1 JASPAR yes 28961464
chr1 54629868 54629879 PROP1 JASPAR yes 28961465
chr1 54629868 54629884 POU4F2 JASPAR yes 28961466
chr1 54629868 54629884 POU4F3 JASPAR yes 28961467
Genes associated with rs139109731[chr1:54629868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More