EnhancerDB
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  3. rs139161261[chr1:2069560]
Enhancers that have rs139161261[chr1:2069560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2056625 2074371 enh11419
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139161261[chr1:2069560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2067890 2069905 TCF7L2 GTRD no Colon (HCT116) 107801807
chr1 2069559 2069567 MEIS2 JASPAR yes 26219168
chr1 2069559 2069567 MEIS3 JASPAR yes 26219169
chr1 2069560 2069564 NFE TRANSFAC yes 26219170
Genes associated with rs139161261[chr1:2069560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More