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- rs139399886[chr16:29856887]
Enhancers that have rs139399886[chr16:29856887]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
29856513 |
29856888 |
vista22341 |
|
|
Transcript factors that have rs139399886[chr16:29856887]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
29856666
|
29857004
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108191789
|
|
|
chr16
|
29856671
|
29857634
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108191790
|
|
|
chr16
|
29856671
|
29857724
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108191791
|
|
|
chr16
|
29856687
|
29857368
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108191792
|
|
|
chr16
|
29856710
|
29856998
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108191793
|
|
|
chr16
|
29856798
|
29857749
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108191794
|
|
|
chr16
|
29856885
|
29857645
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108191795
|
|
Genes associated with rs139399886[chr16:29856887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
30454952
|
30457502
|
-
|
SEPHS2
|
ENSG00000179918.15
|
30457502
|
598065
|
Liver
|
0.360124
|
14747
|
|
|
chr16
|
30759591
|
30772490
|
+
|
PHKG2
|
ENSG00000156873.11
|
30759591
|
902704
|
Adrenal
|
0.312375
|
14760
|
|