EnhancerDB
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  3. rs139485260[chr18:55480829]
Enhancers that have rs139485260[chr18:55480829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55476845 55489580 enh17732
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Spleen Epithelial (MCF-7)
Transcript factors that have rs139485260[chr18:55480829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55480514 55480876 JUN UCSC Txn Factor no Conserved 108337965
chr18 55480519 55480903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823504
chr18 55480519 55480903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108337966
chr18 55480536 55480866 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823505
chr18 55480536 55480866 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108337967
chr18 55480536 55480876 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823506
chr18 55480536 55480876 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108337968
chr18 55480538 55480838 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108337970
chr18 55480538 55480894 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108337971
chr18 55480559 55480835 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823509
chr18 55480559 55480835 JUND UCSC Txn Factor no Conserved 108337975
chr18 55480559 55480835 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108337976
chr18 55480726 55481032 ZNF143 GTRD no Epithelial (MCF-7) 21823512
chr18 55480726 55481032 ZNF143 GTRD no Epithelial (MCF-7) 108337980
Genes associated with rs139485260[chr18:55480829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More