EnhancerDB
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  3. rs139621682[chr19:6354219]
Enhancers that have rs139621682[chr19:6354219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6350085 6356315 enh17890
Placenta Epithelial (MCF-7)
Transcript factors that have rs139621682[chr19:6354219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6353865 6354776 ZNF143 GTRD no Epithelial (MCF-7) 21845175
chr19 6353880 6354526 ZNF143 GTRD no Epithelial (MCF-7) 21845176
chr19 6353991 6354409 ZNF143 GTRD no Epithelial (MCF-7) 21845177
chr19 6354035 6354460 ZNF143 GTRD no Epithelial (MCF-7) 21845178
chr19 6354049 6354475 ZNF143 GTRD no Epithelial (MCF-7) 21845179
chr19 6354058 6354453 ZNF143 GTRD no Epithelial (MCF-7) 21845180
chr19 6354071 6354425 ZNF143 GTRD no Epithelial (MCF-7) 21845181
chr19 6354077 6354414 ZNF143 GTRD no Epithelial (MCF-7) 21845182
chr19 6354167 6354430 ZNF143 GTRD no Epithelial (MCF-7) 21845183
chr19 6354179 6354438 ZNF143 GTRD no Epithelial (MCF-7) 21845184
chr19 6354211 6354225 ONECUT3 JASPAR yes 112268293
chr19 6354212 6354227 FOXA1 JASPAR yes 112268294
chr19 6354213 6354224 FOXB1 JASPAR yes 112268295
chr19 6354213 6354224 FOXC1 JASPAR yes 112268296
chr19 6354213 6354225 FOXC2 JASPAR yes 112268297
chr19 6354214 6354226 FOXI1 JASPAR yes 112268298
chr19 6354215 6354230 HNF1A JASPAR yes 112268299
chr19 6354216 6354232 POU4F2 JASPAR yes 112268300
chr19 6354216 6354232 POU4F3 JASPAR yes 112268301
chr19 6354219 6354233 POU1F1 JASPAR yes 112268302
chr19 6354219 6354234 FOXP1 JASPAR yes 112268303
Genes associated with rs139621682[chr19:6354219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More