EnhancerDB
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  3. rs139796560[chr2:121435396]
Enhancers that have rs139796560[chr2:121435396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121423705 121444599 enh44877
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Bone (Osteoblast) Thyroid Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs139796560[chr2:121435396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121435381 121435401 TBX19 JASPAR yes 76562755
chr2 121435383 121435399 T JASPAR yes 76562756
chr2 121435387 121435402 SCRT1 JASPAR yes 76562757
chr2 121435395 121435405 ALX3 JASPAR yes 76562758
chr2 121435395 121435405 EMX1 JASPAR yes 76562759
chr2 121435395 121435405 GSX2 JASPAR yes 76562760
chr2 121435395 121435405 HOXA2 JASPAR yes 76562761
chr2 121435395 121435405 HOXB2 JASPAR yes 76562762
chr2 121435395 121435405 HOXB3 JASPAR yes 76562763
chr2 121435395 121435405 MEOX1 JASPAR yes 76562764
chr2 121435395 121435405 MEOX2 JASPAR yes 76562765
chr2 121435395 121435405 MIXL1 JASPAR yes 76562766
chr2 121435395 121435405 MNX1 JASPAR yes 76562767
chr2 121435396 121435404 LMX1A JASPAR yes 76562768
chr2 121435396 121435404 LMX1B JASPAR yes 76562769
chr2 121435396 121435404 NKX6-1 JASPAR yes 76562770
chr2 121435396 121435404 NKX6-2 JASPAR yes 76562771
chr2 121435396 121435404 PDX1 JASPAR yes 76562772
chr2 121435396 121435404 VAX1 JASPAR yes 76562773
chr2 121435396 121435404 VAX2 JASPAR yes 76562774
chr2 121435396 121435404 VSX1 JASPAR yes 76562775
Genes associated with rs139796560[chr2:121435396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More