EnhancerDB
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  3. rs139851323[chr19:6552568]
Enhancers that have rs139851323[chr19:6552568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6545685 6555175 enh4987
Bone Marrow (K562) Cervix (HeLa-S3) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422)
Transcript factors that have rs139851323[chr19:6552568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6551159 6552672 TCF7L2 GTRD no Colon (HCT116) 21845654
chr19 6551324 6552579 ZNF274 GTRD no Bone Marrow (K562) 21845656
chr19 6551327 6552709 ZNF274 GTRD no Bone Marrow (K562) 21845657
chr19 6551563 6552669 TCF7L2 GTRD no Colon (HCT116) 21845666
chr19 6551771 6552627 ZNF274 GTRD no Bone Marrow (K562) 21845676
chr19 6551833 6552586 ZNF274 GTRD no Bone Marrow (K562) 21845688
chr19 6552333 6552823 TCF7L2 GTRD no Colon (HCT116) 21845726
chr19 6552560 6552573 NR2F1 JASPAR yes 112275591
chr19 6552561 6552569 CREB1 JASPAR yes 112275592
chr19 6552562 6552580 RARA JASPAR yes 112275593
chr19 6552564 6552568 ESR1 TRANSFAC yes 112275594
Genes associated with rs139851323[chr19:6552568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More