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- rs140487209[chr17:79707878]
Enhancers that have rs140487209[chr17:79707878]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
79706865 |
79710945 |
enh89892 |
|
|
Transcript factors that have rs140487209[chr17:79707878]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
79705091
|
79708924
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21798395
|
|
|
chr17
|
79705222
|
79708909
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21798397
|
|
|
chr17
|
79707870
|
79707885
|
ZIC3
|
JASPAR
|
yes
|
|
56341521
|
|
|
chr17
|
79707870
|
79707885
|
ZIC4
|
JASPAR
|
yes
|
|
56341522
|
|
|
chr17
|
79707872
|
79707888
|
GLIS1
|
JASPAR
|
yes
|
|
56341523
|
|
Genes associated with rs140487209[chr17:79707878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
79762008
|
79771889
|
+
|
GCGR
|
ENSG00000215644.5
|
79762008
|
54130
|
Spleen
|
8.28034e-14
|
16363
|
|
|
chr17
|
79762008
|
79771889
|
+
|
GCGR
|
ENSG00000215644.5
|
79762008
|
54130
|
Lung
|
2.80112e-09
|
16363
|
|