EnhancerDB
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  3. rs140564674[chr12:52890630]
Enhancers that have rs140564674[chr12:52890630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52890343 52890794 vista13479
VISTA
Transcript factors that have rs140564674[chr12:52890630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52890202 52890802 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034013
chr12 52890250 52890770 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034014
chr12 52890268 52890678 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034015
chr12 52890286 52890750 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108034016
chr12 52890296 52890876 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034017
chr12 52890332 52890656 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034018
chr12 52890349 52890669 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034019
chr12 52890356 52890732 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108034020
chr12 52890372 52890682 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034021
chr12 52890384 52890654 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108034022
chr12 52890398 52890658 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034023
chr12 52890417 52890673 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108034024
chr12 52890439 52890723 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034025
chr12 52890616 52890637 ZNF263 JASPAR yes 82407373
chr12 52890620 52890641 ZNF263 JASPAR yes 82407375
chr12 52890630 52890641 E2F6 JASPAR yes 82407376
Genes associated with rs140564674[chr12:52890630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More