EnhancerDB
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  3. rs140825579[chr17:39108846]
Enhancers that have rs140825579[chr17:39108846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39099743 39114455 enh17146
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Ovary Esophagus Placenta Colon (HCT116) Lung (PC-9)
chr17 39108843 39109211 vista24764
VISTA
Transcript factors that have rs140825579[chr17:39108846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39108141 39109140 TCF7L2 GTRD no Colon (HCT116) 21757342
chr17 39108141 39109140 TCF7L2 GTRD no Colon (HCT116) 108258042
chr17 39108455 39108904 ZNF274 GTRD no Bone Marrow (K562) 108258043
chr17 39108802 39110107 TCF7L2 GTRD no Colon (HCT116) 21757343
chr17 39108802 39110107 TCF7L2 GTRD no Colon (HCT116) 108258044
chr17 39108831 39108846 FOXP1 JASPAR yes 21237476
chr17 39108831 39108846 FOXP1 JASPAR yes 54247299
chr17 39108833 39108847 IRF7 JASPAR yes 21237478
chr17 39108833 39108847 IRF7 JASPAR yes 54247301
chr17 39108837 39108851 RORA JASPAR yes 21237479
chr17 39108837 39108851 RORA JASPAR yes 54247302
chr17 39108843 39108849 ESR1 TRANSFAC yes 21237480
chr17 39108843 39108849 ESR1 TRANSFAC yes 54247303
chr17 39108845 39108849 ESR1 TRANSFAC yes 21237481
chr17 39108845 39108849 ESR1 TRANSFAC yes 54247304
chr17 39108846 39108855 SNAI2 JASPAR yes 21237482
chr17 39108846 39108855 SNAI2 JASPAR yes 54247305
Genes associated with rs140825579[chr17:39108846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More