EnhancerDB
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  3. rs142227309[chr17:54766653]
Enhancers that have rs142227309[chr17:54766653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54763645 54770655 enh17236
Thyroid Placenta
Transcript factors that have rs142227309[chr17:54766653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54766643 54766656 EOMES JASPAR yes 54903631
chr17 54766645 54766655 TBR1 JASPAR yes 54903632
chr17 54766645 54766656 TBX20 JASPAR yes 54903633
chr17 54766645 54766656 TBX2 JASPAR yes 54903634
chr17 54766646 54766656 TBX21 JASPAR yes 54903635
chr17 54766647 54766655 MGA JASPAR yes 54903636
chr17 54766647 54766655 TBX15 JASPAR yes 54903637
chr17 54766647 54766655 TBX1 JASPAR yes 54903638
chr17 54766647 54766655 TBX4 JASPAR yes 54903639
chr17 54766647 54766655 TBX5 JASPAR yes 54903640
chr17 54766647 54766656 ZEB1 JASPAR yes 54903641
chr17 54766647 54766659 PKNOX1 JASPAR yes 54903642
chr17 54766647 54766659 TGIF1 JASPAR yes 54903643
chr17 54766647 54766660 ZBTB18 JASPAR yes 54903644
chr17 54766648 54766658 FIGLA JASPAR yes 54903645
chr17 54766648 54766658 ID4 JASPAR yes 54903646
chr17 54766648 54766658 TCF3 JASPAR yes 54903647
chr17 54766648 54766658 TCF4 JASPAR yes 54903648
chr17 54766649 54766658 SNAI2 JASPAR yes 54903649
chr17 54766650 54766655 USF2 TRANSFAC yes 54903650
Genes associated with rs142227309[chr17:54766653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More