EnhancerDB
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  3. rs142239803[chr1:116834959]
Enhancers that have rs142239803[chr1:116834959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116827040 116837335 enh579
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs142239803[chr1:116834959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116833866 116835327 ZNF274 GTRD no Blood (GM12878) 21331876
chr1 116833995 116835280 ZNF274 GTRD no Blood (GM12878) 21331877
chr1 116834514 116835116 MYOD GTRD no Muscle (Myoblast) 21331878
chr1 116834575 116835492 ZNF274 GTRD no Blood (GM12878) 21331880
chr1 116834703 116835162 ZNF274 GTRD no Blood (GM12878) 21331881
chr1 116834957 116834961 LFA1 TRANSFAC yes 31790424
Genes associated with rs142239803[chr1:116834959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More