EnhancerDB
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  3. rs142454829[chr17:41289450]
Enhancers that have rs142454829[chr17:41289450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41283945 41296395 enh60671
Pancreas Liver (HepG2) Blood (OCI-LY7)
Transcript factors that have rs142454829[chr17:41289450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41289439 41289454 HNF1A JASPAR yes 54327795
chr17 41289440 41289453 HNF1B JASPAR yes 54327796
chr17 41289443 41289453 GSX2 JASPAR yes 54327797
chr17 41289443 41289453 HOXB2 JASPAR yes 54327798
chr17 41289443 41289453 HOXB3 JASPAR yes 54327799
chr17 41289443 41289453 MNX1 JASPAR yes 54327800
chr17 41289443 41289453 POU6F1 JASPAR yes 54327801
chr17 41289443 41289454 HOXA10 JASPAR yes 54327802
chr17 41289444 41289452 LMX1A JASPAR yes 54327803
chr17 41289444 41289452 LMX1B JASPAR yes 54327804
chr17 41289444 41289452 NKX6-1 JASPAR yes 54327805
chr17 41289444 41289452 NKX6-2 JASPAR yes 54327806
chr17 41289444 41289452 VAX1 JASPAR yes 54327807
chr17 41289444 41289452 VAX2 JASPAR yes 54327808
chr17 41289444 41289452 VSX1 JASPAR yes 54327809
chr17 41289444 41289452 VSX2 JASPAR yes 54327810
chr17 41289445 41289466 IRF1 JASPAR yes 54327811
chr17 41289447 41289462 FOXP1 JASPAR yes 54327812
chr17 41289448 41289463 FOXP1 JASPAR yes 54327813
chr17 41289448 41289469 IRF1 JASPAR yes 54327814
chr17 41289449 41289455 TBP TRANSFAC yes 54327815
chr17 41289449 41289464 FOXP1 JASPAR yes 54327816
chr17 41289450 41289471 IRF1 JASPAR yes 54327817
Genes associated with rs142454829[chr17:41289450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More