EnhancerDB
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  3. rs142823275[chr1:93402634]
Enhancers that have rs142823275[chr1:93402634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 93392085 93405724 enh12051
Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Spleen Muscle (Myotube) Uterus Stomach
Transcript factors that have rs142823275[chr1:93402634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 93402627 93402638 PHOX2A JASPAR yes 30777165
chr1 93402629 93402639 HOXD13 JASPAR yes 30777166
chr1 93402629 93402640 HOXA10 JASPAR yes 30777167
chr1 93402630 93402640 ALX3 JASPAR yes 30777168
chr1 93402630 93402640 GSX2 JASPAR yes 30777169
chr1 93402630 93402640 MNX1 JASPAR yes 30777170
chr1 93402631 93402639 BARX1 JASPAR yes 30777171
chr1 93402631 93402639 BSX JASPAR yes 30777172
chr1 93402631 93402639 ISL2 JASPAR yes 30777173
chr1 93402631 93402639 LMX1B JASPAR yes 30777174
chr1 93402631 93402639 MSX1 JASPAR yes 30777175
chr1 93402631 93402639 MSX2 JASPAR yes 30777176
Genes associated with rs142823275[chr1:93402634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More