-
Home
- SNP
- rs142839477[chr16:88919892]
Enhancers that have rs142839477[chr16:88919892]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
88919657 |
88920044 |
vista23526 |
|
|
Transcript factors that have rs142839477[chr16:88919892]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
88918561
|
88919991
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108224128
|
|
|
chr16
|
88918660
|
88920156
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108224129
|
|
|
chr16
|
88919394
|
88920454
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108224131
|
|
|
chr16
|
88919397
|
88920437
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224132
|
|
|
chr16
|
88919437
|
88920410
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108224133
|
|
|
chr16
|
88919498
|
88929400
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224134
|
|
|
chr16
|
88919498
|
88929400
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108224135
|
|
|
chr16
|
88919596
|
88921917
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108224136
|
|
|
chr16
|
88919596
|
88921917
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108224137
|
|
|
chr16
|
88919859
|
88920063
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108224138
|
|
|
chr16
|
88919889
|
88919908
|
RFX2
|
JASPAR
|
yes
|
|
49419161
|
|
Genes associated with rs142839477[chr16:88919892], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |