-
Home
- SNP
- rs143011430[chr19:12724912]
Enhancers that have rs143011430[chr19:12724912]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
12717685 |
12730695 |
enh5012 |
|
|
Transcript factors that have rs143011430[chr19:12724912]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
12720741
|
12725015
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108385771
|
|
|
chr19
|
12720791
|
12725319
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108385772
|
|
|
chr19
|
12724346
|
12724936
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385780
|
|
|
chr19
|
12724413
|
12725097
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385782
|
|
|
chr19
|
12724466
|
12725062
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385787
|
|
|
chr19
|
12724486
|
12725002
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385790
|
|
|
chr19
|
12724502
|
12725025
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108385791
|
|
|
chr19
|
12724518
|
12724950
|
RUNX3
|
UCSC Txn Factor
|
no
|
Conserved
|
108385793
|
|
|
chr19
|
12724518
|
12724950
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385794
|
|
|
chr19
|
12724539
|
12725039
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385796
|
|
|
chr19
|
12724554
|
12725144
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385797
|
|
|
chr19
|
12724557
|
12724926
|
NFIC
|
UCSC Txn Factor
|
no
|
Conserved
|
108385799
|
|
|
chr19
|
12724557
|
12724926
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385800
|
|
|
chr19
|
12724662
|
12725098
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385814
|
|
|
chr19
|
12724676
|
12725056
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385817
|
|
|
chr19
|
12724684
|
12725084
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108385818
|
|
|
chr19
|
12724902
|
12724923
|
IRF1
|
JASPAR
|
yes
|
|
112489899
|
|
|
chr19
|
12724906
|
12724920
|
STAT1
|
JASPAR
|
yes
|
|
112489900
|
|
|
chr19
|
12724906
|
12724921
|
STAT2
|
JASPAR
|
yes
|
|
112489901
|
|
|
chr19
|
12724908
|
12724919
|
ETV2
|
JASPAR
|
yes
|
|
112489902
|
|
|
chr19
|
12724911
|
12724917
|
ETS1
|
JASPAR
|
yes
|
|
112489903
|
|
Genes associated with rs143011430[chr19:12724912], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |