-
Home
- SNP
- rs143166530[chr17:41160329]
Enhancers that have rs143166530[chr17:41160329]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
41156311 |
41161089 |
enh86249 |
|
|
Transcript factors that have rs143166530[chr17:41160329]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
41160322
|
41160334
|
PKNOX1
|
JASPAR
|
yes
|
|
54323934
|
|
|
chr17
|
41160322
|
41160334
|
TGIF1
|
JASPAR
|
yes
|
|
54323935
|
|
|
chr17
|
41160323
|
41160332
|
SNAI2
|
JASPAR
|
yes
|
|
54323936
|
|
|
chr17
|
41160323
|
41160333
|
FIGLA
|
JASPAR
|
yes
|
|
54323937
|
|
|
chr17
|
41160323
|
41160333
|
ID4
|
JASPAR
|
yes
|
|
54323938
|
|
|
chr17
|
41160323
|
41160333
|
TCF3
|
JASPAR
|
yes
|
|
54323939
|
|
|
chr17
|
41160323
|
41160333
|
TCF4
|
JASPAR
|
yes
|
|
54323940
|
|
|
chr17
|
41160326
|
41160339
|
SMAD2
|
JASPAR
|
yes
|
|
54323941
|
|
Genes associated with rs143166530[chr17:41160329], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
41166622
|
41177140
|
-
|
VAT1
|
ENSG00000108828.11
|
41177140
|
6293
|
Lung
|
0.190074
|
15891
|
|
|
chr17
|
41363854
|
41372061
|
+
|
TMEM106A
|
ENSG00000184988.4
|
41363854
|
203525
|
Stomach
|
0.157133
|
15895
|
|