EnhancerDB
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Enhancers that have rs143250844[chr19:3562141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3558330 3566135 enh17866
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Blood (OCI-LY7) Placenta Colon (HCT116) Lung (PC-9)
Transcript factors that have rs143250844[chr19:3562141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3561855 3563776 TCF7L2 GTRD no Colon (HCT116) 21839635
chr19 3561855 3563776 TCF7L2 GTRD no Colon (HCT116) 108367835
chr19 3561885 3563548 TCF7L2 GTRD no Colon (HCT116) 21839636
chr19 3561885 3563548 TCF7L2 GTRD no Colon (HCT116) 108367836
chr19 3561898 3562744 TCF7L2 GTRD no Colon (HCT116) 21839637
chr19 3561898 3562744 TCF7L2 GTRD no Colon (HCT116) 108367837
chr19 3561917 3562833 TCF7L2 GTRD no Colon (HCT116) 21839638
chr19 3561917 3562833 TCF7L2 GTRD no Colon (HCT116) 108367838
chr19 3561981 3563212 ZNF274 GTRD no Cervix (HeLa-S3) 21839639
chr19 3561981 3563212 ZNF274 GTRD no Cervix (HeLa-S3) 108367839
chr19 3562070 3563176 ZNF274 GTRD no Cervix (HeLa-S3) 21839640
chr19 3562070 3563176 ZNF274 GTRD no Cervix (HeLa-S3) 108367840
chr19 3562104 3563228 ZBTB33 GTRD no Lung (A549) 108367841
chr19 3562105 3564485 TCF7L2 GTRD no Colon (HCT116) 21839641
chr19 3562105 3564485 TCF7L2 GTRD no Colon (HCT116) 108367842
chr19 3562107 3562629 ZBTB33 GTRD no Lung (A549) 108367843
chr19 3562110 3563206 ZBTB33 GTRD no Lung (A549) 108367844
chr19 3562111 3562789 TCF7L2 GTRD no Colon (HCT116) 21839642
chr19 3562111 3562789 TCF7L2 GTRD no Colon (HCT116) 108367845
chr19 3562111 3563184 ZNF274 GTRD no Cervix (HeLa-S3) 21839643
chr19 3562111 3563184 ZNF274 GTRD no Cervix (HeLa-S3) 108367846
chr19 3562116 3563061 ZBTB33 GTRD no Lung (A549) 108367847
chr19 3562117 3563122 ZNF274 GTRD no Cervix (HeLa-S3) 21839644
chr19 3562117 3563122 ZNF274 GTRD no Cervix (HeLa-S3) 108367848
Genes associated with rs143250844[chr19:3562141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More