EnhancerDB
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  3. rs143401830[chr16:89132630]
Enhancers that have rs143401830[chr16:89132630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89124640 89136375 enh60640
Cervix (HeLa-S3) Epithelial (MCF-7) Blood (OCI-LY7) Blood (GM12878)
Transcript factors that have rs143401830[chr16:89132630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89131654 89133120 ZNF143 GTRD no Epithelial (MCF-7) 21737965
chr16 89131654 89133120 ZNF143 GTRD no Epithelial (MCF-7) 108224974
chr16 89131679 89134725 ZNF143 GTRD no Epithelial (MCF-7) 21737966
chr16 89131679 89134725 ZNF143 GTRD no Epithelial (MCF-7) 108224975
chr16 89131812 89133777 TCF7L2 GTRD no Colon (HCT116) 108224977
chr16 89131815 89134310 TCF7L2 GTRD no Colon (HCT116) 108224978
chr16 89131819 89133891 TCF7L2 GTRD no Colon (HCT116) 108224979
chr16 89131924 89133895 ZNF143 GTRD no Epithelial (MCF-7) 21737968
chr16 89131924 89133895 ZNF143 GTRD no Epithelial (MCF-7) 108224982
chr16 89132284 89133190 ZNF143 GTRD no Epithelial (MCF-7) 21737969
chr16 89132305 89133020 ZNF274 GTRD no Cervix (HeLa-S3) 21737970
chr16 89132321 89132979 ZNF143 GTRD no Epithelial (MCF-7) 21737971
chr16 89132325 89132982 ZNF143 GTRD no Epithelial (MCF-7) 21737972
chr16 89132455 89132898 ZNF143 GTRD no Epithelial (MCF-7) 21737973
chr16 89132474 89132860 ZNF274 GTRD no Blood (GM12878) 21737974
chr16 89132474 89132883 ZNF274 GTRD no Cervix (HeLa-S3) 21737975
chr16 89132610 89132631 IRF1 JASPAR yes 12321356
chr16 89132611 89132631 RREB1 JASPAR yes 12321357
chr16 89132621 89132635 SPIC JASPAR yes 12321358
Genes associated with rs143401830[chr16:89132630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More