-
Home
- SNP
- rs143888551[chr1:185343229]
Enhancers that have rs143888551[chr1:185343229]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
185333692 |
185347015 |
enh50099 |
|
|
| chr1 |
185343087 |
185343625 |
vista4256 |
|
|
Transcript factors that have rs143888551[chr1:185343229]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
185342518
|
185343648
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852224
|
|
|
chr1
|
185342541
|
185343404
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852225
|
|
|
chr1
|
185342541
|
185343498
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852226
|
|
|
chr1
|
185342552
|
185343382
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852227
|
|
|
chr1
|
185342560
|
185343462
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852228
|
|
|
chr1
|
185342606
|
185343496
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107852230
|
|
|
chr1
|
185342607
|
185343317
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852231
|
|
|
chr1
|
185342631
|
185343570
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107852232
|
|
|
chr1
|
185342645
|
185343274
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852233
|
|
|
chr1
|
185342666
|
185343457
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107852234
|
|
|
chr1
|
185342673
|
185343244
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852235
|
|
|
chr1
|
185342702
|
185343525
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852236
|
|
|
chr1
|
185342726
|
185343351
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107852237
|
|
|
chr1
|
185342734
|
185343320
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852238
|
|
|
chr1
|
185342740
|
185343230
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852239
|
|
|
chr1
|
185342792
|
185343294
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852242
|
|
|
chr1
|
185342800
|
185343249
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852243
|
|
|
chr1
|
185342839
|
185343656
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107852244
|
|
|
chr1
|
185342840
|
185343337
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852245
|
|
|
chr1
|
185342865
|
185343246
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852246
|
|
|
chr1
|
185342891
|
185343294
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852247
|
|
|
chr1
|
185342907
|
185343268
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852248
|
|
|
chr1
|
185342921
|
185343241
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107852249
|
|
|
chr1
|
185343047
|
185343323
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107852251
|
|
|
chr1
|
185343056
|
185343311
|
FOS
|
UCSC Txn Factor
|
no
|
Conserved
|
107852252
|
|
|
chr1
|
185343073
|
185343277
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107852253
|
|
|
chr1
|
185343220
|
185343236
|
ZNF143
|
JASPAR
|
yes
|
|
33804628
|
|
|
chr1
|
185343220
|
185343236
|
ZNF143
|
JASPAR
|
yes
|
|
118416650
|
|
|
chr1
|
185343228
|
185343233
|
SP1
|
TRANSFAC
|
yes
|
|
33804629
|
|
|
chr1
|
185343228
|
185343233
|
SP1
|
TRANSFAC
|
yes
|
|
118416651
|
|
Genes associated with rs143888551[chr1:185343229], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |