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- rs143888713[chr19:1654379]
Enhancers that have rs143888713[chr19:1654379]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
1654223 |
1654456 |
vista28171 |
|
|
Transcript factors that have rs143888713[chr19:1654379]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
1649891
|
1655223
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108354318
|
|
|
chr19
|
1649891
|
1655223
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108354319
|
|
|
chr19
|
1653714
|
1654975
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108354473
|
|
|
chr19
|
1653914
|
1654911
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108354474
|
|
|
chr19
|
1653946
|
1654417
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108354475
|
|
|
chr19
|
1653947
|
1654944
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108354476
|
|
|
chr19
|
1654027
|
1654432
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108354477
|
|
|
chr19
|
1654046
|
1656459
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108354478
|
|
|
chr19
|
1654061
|
1654578
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108354479
|
|
|
chr19
|
1654072
|
1654416
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108354480
|
|
|
chr19
|
1654136
|
1654559
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108354481
|
|
|
chr19
|
1654143
|
1654627
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108354482
|
|
|
chr19
|
1654144
|
1654983
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108354483
|
|
|
chr19
|
1654172
|
1654767
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108354484
|
|
|
chr19
|
1654188
|
1654448
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
108354485
|
|
|
chr19
|
1654222
|
1654713
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108354486
|
|
|
chr19
|
1654243
|
1654922
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108354487
|
|
|
chr19
|
1654265
|
1654693
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108354488
|
|
|
chr19
|
1654295
|
1654699
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
108354489
|
|
|
chr19
|
1654330
|
1654951
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108354490
|
|
|
chr19
|
1654368
|
1654969
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108354491
|
|
|
chr19
|
1654375
|
1654386
|
E2F4
|
JASPAR
|
yes
|
|
70780687
|
|
|
chr19
|
1654376
|
1654381
|
SP1
|
TRANSFAC
|
yes
|
|
70780688
|
|
|
chr19
|
1654376
|
1654382
|
SP1
|
TRANSFAC
|
yes
|
|
70780689
|
|
Genes associated with rs143888713[chr19:1654379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |