EnhancerDB
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  3. rs143975575[chr1:181049554]
Enhancers that have rs143975575[chr1:181049554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181040771 181050755 enh12429
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube)
Transcript factors that have rs143975575[chr1:181049554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181049007 181049592 TCF7L2 GTRD no Colon (HCT116) 21354218
chr1 181049544 181049555 GCM1 JASPAR yes 33551242
chr1 181049544 181049563 CTCF JASPAR yes 33551243
chr1 181049545 181049555 GCM2 JASPAR yes 33551244
chr1 181049548 181049560 HES5 JASPAR yes 33551245
Genes associated with rs143975575[chr1:181049554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More