EnhancerDB
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  3. rs144776539[chr18:55102172]
Enhancers that have rs144776539[chr18:55102172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55102016 55102207 vista27553
VISTA
Transcript factors that have rs144776539[chr18:55102172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55099932 55102594 ZBTB33 GTRD no Brain (SK-N-SH) 108337676
chr18 55099932 55102594 ZBTB33 GTRD no Brain (SK-N-SH) 108337677
chr18 55101516 55102227 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108337718
chr18 55101516 55102227 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108337719
chr18 55102031 55102631 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108337726
chr18 55102100 55102938 POLR2A UCSC Txn Factor no Conserved 108337727
chr18 55102169 55102180 GCM1 JASPAR yes 42713079
Genes associated with rs144776539[chr18:55102172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More