-
Home
- SNP
- rs146373797[chr1:109850560]
Enhancers that have rs146373797[chr1:109850560]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
109850258 |
109850620 |
vista2852 |
|
|
Transcript factors that have rs146373797[chr1:109850560]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
109849067
|
109851806
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
107819290
|
|
|
chr1
|
109849783
|
109850887
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107819291
|
|
|
chr1
|
109849900
|
109850986
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107819295
|
|
|
chr1
|
109850107
|
109850658
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107819305
|
|
|
chr1
|
109850145
|
109850561
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107819312
|
|
|
chr1
|
109850155
|
109850595
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107819314
|
|
|
chr1
|
109850211
|
109850630
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107819317
|
|
|
chr1
|
109850223
|
109851268
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107819318
|
|
|
chr1
|
109850229
|
109850585
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107819319
|
|
|
chr1
|
109850255
|
109851164
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107819321
|
|
|
chr1
|
109850258
|
109850635
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107819322
|
|
|
chr1
|
109850278
|
109850670
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107819327
|
|
|
chr1
|
109850549
|
109850560
|
YY2
|
JASPAR
|
yes
|
|
118346952
|
|
Genes associated with rs146373797[chr1:109850560], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |