EnhancerDB
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  3. rs146454660[chr6:37523080]
Enhancers that have rs146454660[chr6:37523080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37512005 37533256 enh9092
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Thymus
chr6 37522898 37523251 vista51822
VISTA
Transcript factors that have rs146454660[chr6:37523080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540106
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540107
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540108
chr6 37523074 37523084 POU6F2 JASPAR yes 70358777
chr6 37523074 37523084 POU6F2 JASPAR yes 101418874
chr6 37523075 37523085 GSX1 JASPAR yes 70358778
chr6 37523075 37523085 GSX2 JASPAR yes 70358779
chr6 37523075 37523085 GSX1 JASPAR yes 101418875
chr6 37523075 37523085 GSX2 JASPAR yes 101418876
chr6 37523075 37523086 HOXC13 JASPAR yes 70358780
chr6 37523075 37523086 HOXC13 JASPAR yes 101418877
chr6 37523076 37523084 NKX6-1 JASPAR yes 70358781
chr6 37523076 37523084 NKX6-2 JASPAR yes 70358782
chr6 37523076 37523084 NKX6-1 JASPAR yes 101418878
chr6 37523076 37523084 NKX6-2 JASPAR yes 101418879
chr6 37523078 37523082 YY1 TRANSFAC yes 70358783
chr6 37523078 37523082 YY1 TRANSFAC yes 101418880
Genes associated with rs146454660[chr6:37523080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More