EnhancerDB
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  3. rs148883533[chr1:52648946]
Enhancers that have rs148883533[chr1:52648946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52648605 52665695 enh11852
Ovary Thyroid Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs148883533[chr1:52648946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52648936 52648946 EMX1 JASPAR yes 28887903
chr1 52648936 52648946 EMX2 JASPAR yes 28887904
chr1 52648936 52648946 ESX1 JASPAR yes 28887905
chr1 52648936 52648946 GSX1 JASPAR yes 28887906
chr1 52648936 52648946 GSX2 JASPAR yes 28887907
chr1 52648936 52648946 HESX1 JASPAR yes 28887908
chr1 52648936 52648946 HOXB2 JASPAR yes 28887909
chr1 52648936 52648946 HOXB3 JASPAR yes 28887910
chr1 52648936 52648946 LBX2 JASPAR yes 28887911
chr1 52648936 52648946 LHX2 JASPAR yes 28887912
chr1 52648936 52648946 LHX6 JASPAR yes 28887913
chr1 52648936 52648946 MIXL1 JASPAR yes 28887914
chr1 52648936 52648946 MNX1 JASPAR yes 28887915
chr1 52648936 52648946 NOTO JASPAR yes 28887916
chr1 52648936 52648946 POU6F1 JASPAR yes 28887917
chr1 52648936 52648946 RAX JASPAR yes 28887918
chr1 52648937 52648951 POU1F1 JASPAR yes 28887929
chr1 52648938 52648950 POU3F2 JASPAR yes 28887930
chr1 52648938 52648951 POU3F3 JASPAR yes 28887931
Genes associated with rs148883533[chr1:52648946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 52838501 52870131 - ORC1 ENSG00000085840.8 52870131 189555 Heart 0.234861 698