EnhancerDB
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  3. rs149053580[chr1:236103488]
Enhancers that have rs149053580[chr1:236103488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs149053580[chr1:236103488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236102960 236104328 ZNF274 GTRD no Blood (GM12878) 21404030
chr1 236102960 236104328 ZNF274 GTRD no Blood (GM12878) 107886295
chr1 236102996 236104338 ZNF274 GTRD no Bone Marrow (K562) 107886296
chr1 236103004 236104224 ZNF274 GTRD no Blood (GM12878) 21404031
chr1 236103004 236104224 ZNF274 GTRD no Blood (GM12878) 107886297
chr1 236103062 236104392 ZBTB33 GTRD no Lung (A549) 107886298
chr1 236103063 236104173 ZNF143 GTRD no Epithelial (MCF-7) 107886299
chr1 236103099 236104402 ZNF143 GTRD no Epithelial (MCF-7) 107886300
chr1 236103123 236104168 ZNF274 GTRD no Bone Marrow (K562) 107886301
chr1 236103127 236104372 ZNF274 GTRD no Blood (GM12878) 21404033
chr1 236103127 236104372 ZNF274 GTRD no Blood (GM12878) 107886302
chr1 236103149 236104474 ZNF274 GTRD no Cervix (HeLa-S3) 107886303
chr1 236103155 236104193 ZNF143 GTRD no Epithelial (MCF-7) 107886304
chr1 236103178 236104238 ZNF274 GTRD no Blood (GM12878) 21404034
chr1 236103178 236104238 ZNF274 GTRD no Blood (GM12878) 107886305
chr1 236103225 236104163 ZNF274 GTRD no Liver (HepG2) 107886306
chr1 236103225 236104302 ZNF274 GTRD no Bone Marrow (K562) 107886307
chr1 236103229 236104337 ZBTB33 GTRD no Lung (A549) 107886308
chr1 236103257 236104194 ZNF274 GTRD no Bone Marrow (K562) 107886309
chr1 236103359 236104130 ZNF274 GTRD no Blood (GM12878) 21404035
chr1 236103359 236104130 ZNF274 GTRD no Blood (GM12878) 107886310
chr1 236103367 236104209 ZBTB33 GTRD no Lung (A549) 107886311
chr1 236103375 236104254 ZNF274 GTRD no Blood (GM12878) 21404036
chr1 236103375 236104254 ZNF274 GTRD no Blood (GM12878) 107886312
chr1 236103378 236104042 CTCF GTRD no Lung 107886313
chr1 236103422 236104183 ZNF274 GTRD no Bone Marrow (K562) 107886314
chr1 236103422 236104253 ZNF274 GTRD no Bone Marrow (K562) 107886315
chr1 236103435 236104093 ZNF274 GTRD no Liver (HepG2) 107886316
chr1 236103452 236104085 ZBTB33 GTRD no Lung (A549) 107886317
chr1 236103463 236104077 ZNF274 GTRD no Bone Marrow (K562) 107886318
chr1 236103465 236104148 CTCF GTRD no Spleen 107886319
chr1 236103469 236104267 ZNF274 GTRD no Bone Marrow (K562) 107886320
chr1 236103470 236104188 ZNF274 GTRD no Blood (GM12878) 21404037
chr1 236103470 236104188 ZNF274 GTRD no Blood (GM12878) 107886321
chr1 236103477 236104100 ZNF274 GTRD no Bone Marrow (K562) 107886322
chr1 236103478 236103492 IRF7 JASPAR yes 36390639
Genes associated with rs149053580[chr1:236103488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More