EnhancerDB
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  3. rs149287048[chr1:53769107]
Enhancers that have rs149287048[chr1:53769107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53767365 53772143 enh74217
Muscle (A673) Thyroid Brain (SK-N-SH)
chr1 53769002 53769191 vista1617
VISTA
Transcript factors that have rs149287048[chr1:53769107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53768800 53769320 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107803990
chr1 53769100 53769111 E2F1 JASPAR yes 28922226
chr1 53769100 53769111 E2F1 JASPAR yes 118291223
chr1 53769105 53769121 RFX2 JASPAR yes 28922227
chr1 53769105 53769121 RFX3 JASPAR yes 28922228
chr1 53769105 53769121 RFX4 JASPAR yes 28922229
chr1 53769105 53769121 RFX5 JASPAR yes 28922230
chr1 53769105 53769121 RFX2 JASPAR yes 118291224
chr1 53769105 53769121 RFX3 JASPAR yes 118291225
chr1 53769105 53769121 RFX4 JASPAR yes 118291226
chr1 53769105 53769121 RFX5 JASPAR yes 118291227
chr1 53769106 53769125 RFX2 JASPAR yes 28922231
chr1 53769106 53769125 RFX2 JASPAR yes 118291228
Genes associated with rs149287048[chr1:53769107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More